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Course Description
This course discusses the basics of bioinformatics and its development as well as its relation to biochemical discussions, BLAST analysis, DNA primer and tracer design, synthetic gene construction, nucleic acids both DNA and RNA, protein analysis related to the shape and arrangement of amino acids, protein topology analysis and molecular docking. which is delivered through guided discussions and practice by carrying out computational analysis.
Program Objectives (PO)
- Mampu menunjukkan pengetahuan dasar Bioinformatika untuk menganalisis permasalahan biokimia kontemporer
- Mampu menguasai penggunaan perangkat bioinformatika untuk mengelola, menganalisis, menafsirkan, mendokumentasikan, dan menyimpan data penelitian
- Mampu mengomunikasikan gagasan ilmiah, baik lisan maupun tulisan dengan menggunakan media komunikasi yang tepat sasaran, sebagai bekal belajar sepanjang hayat untuk pengembangan diri akademik
Aktifitas Pembelajaran
-
Pertemuan 1 Dasar-dasar bioinformatika,perkembangan dan perannya -
Pertemuan 2 Dasar-dasar keilmuan biokimia dari bioinformatika -
Pertemuan 3 Database primer -
Pertemuan 4 Database sekunder dan database genotype-phenotype -
Pertemuan 5 Cara menggunakan database struktur molekular -
Pertemuan 6 Perbandingan sekuens dan pencarian database berbasis sekuens -
Pertemuan 7 Cara pemecahan genom eukaryotik -
Pertemuan 8 UTS -
Pertemuan 9 Penyebab genetis dari keanekaragaman individual -
Pertemuan 10 Desain obat rasional berbasis struktur obat dan struktur protein -
Pertemuan 11 Analisis fungsional genomik -
Pertemuan 12 -
Pertemuan 13 Menganalisis genomika dengan demonstrasi terkait database -
Pertemuan 14 Menganalisis transkriptomika dan proteomika dengan emonstrasi terkait database protein -
Pertemuan 15 Melakukan demonstrasi analisis multiomiks -
Pertemuan 16 UAS
References
- Pervsner, J., 2015. , Bioinformatics and Functional Genomic, third edition, USA, Willey Blackwel.
- Selzer, P.M., Marhover, R.J. dan Koch, O. 2018, Applied Bioinformatics, Germany, Springer International Publishing
- Taguchi, 2020, Unsupervised Feature Extraction Applied to Bioinformatics: A PCA Based and TD Based Approach, Tokyo, Springer
- Bedel, J. Korf, I, dan Yandell, M, BLAST, USA, OReilly
Lecturer
Difficult Things About Education.
$75$10
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